Networks use case

Drawn from Cury et al. 2023, Transcriptional profiles and common genes link lung cancer with the development and severity of COVID-19.

Task: What genes are functionally related to my gene(s) of interest in lung tissue?

  • Input genes of interest (9 genes identified as upregulated in both SARS-CoV-2 infected lung cell lines and lung cancer samples). Select “Search.”

../_images/networks-1.png
  • Select desired tissue and data types for the network.

../_images/networks-2.png
  • Select the desired interaction confidence threshold and maximum number of genes.

../_images/networks-3.png
  • Export the network as an image or as text.

../_images/networks-4.png