Use Cases

This section provides practical examples and tutorials demonstrating how to use various HumanBase tools for genomic analysis. Each use case walks through a specific research question and shows how to use the appropriate tools to answer it.

Many of these examples are drawn from real research publications. They demonstrate the power of HumanBase’s integrated approach to analyzing the functional effects of genetic variants, gene expression patterns, and biological networks.

Sequence Analysis Use Cases

• CTCF disruption example
• ExPectoSC use case
• ExPecto use case
• Sei use case
• Beluga (DeepSEA) use case
• Seqweaver use case
• ASD Genome Browser use case
• In Silico Mutagenesis use case

Network Analysis Use Cases

• Functional enrichments in networks use case
• Comparing networks use case
• Edge contributions use case
• Functional module clustering use case
• Networks use case
• NetWAS use case

Tutorials

• Extracting a FASTA file tutorial