==================== Citations ==================== Tissue-specific networks, NetWAS ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Greene CS*, Krishnan A*, Wong AK*, Ricciotti E, Zelaya RA, Himmelstein DS, Zhang R, Hartmann BM, Zaslavsky E, Sealfon SC, Chasman DI, FitzGerald GA, Dolinski K, Grosser T, Troyanskaya OG. (2015). `Understanding multicellular function and disease with human tissue-specific networks `_. Nature Genetics. 10.1038/ng.3259w. Variant effect predictions (ExPecto) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Zhou J, Theesfeld CL, Yao K, Chen KM, Wong AK, and Troyanskaya OG. (2018) Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk, Nature Genetics. Autism gene predictions ~~~~~~~~~~~~~~~~~~~~~~~ Krishnan A*, Zhang R*, Yao V, Theesfeld CL, Wong AK, Tadych A, Volfovsky N, Packer A, Lash A, Troyanskaya OG.(2016) Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder. Nature Neuroscience. Tissue-expression predictions ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ \W. Ju#, C.S. Greene#, F. Eichinger, V. Nair, J.B. Hodgin, M. Bitzer, Y. Lee, Q. Zhu, M. Kehata, M. Li, M.P. Rastaldi, C.D. Cohen, O.G. Troyanskaya*, and M. Kretzler*. Defining cell type specificity at the transcriptional level in human disease. Genome Research. 23:1862-1873. 2013